python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L1-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L2-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L3-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Frontal_cortex 2 -revcomp | gzip > L4-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Frontal_cortex.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L1-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L2-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L3-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_Cerebellum 2 -revcomp | gzip > L4-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_Cerebellum.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L1-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L2-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L3-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_2 2 -revcomp | gzip > L4-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_2.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L354-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_8.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L355-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_9.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L356-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_10.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L357-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_11.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L358-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_12.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L359-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_13.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L360-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_14.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L361-SHARE-RNA-FrontalCortex_Cerebellum_Testes_RNA_20k_15.barcodes_annotated.RNA_UMI.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end1.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L1-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L2-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L3-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-0-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-1-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-2-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-3-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-4-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-5-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-6-9/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-0/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-1/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-2/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-3/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-4/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-5/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-6/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-7/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L346-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_1.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L347-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_2.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L348-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_3.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L349-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_4.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L350-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_5.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L351-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_6.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L352-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_7.barcodes_annotated.Vervet_testis_1.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.end2.fastq.gz 2 barcodes_Vervet_testis_1 2 -revcomp | gzip > L4-7-8/SK-L353-SHARE-ATAC-FrontalCortex_Cerebellum_Testes_ATAC_20k_8.barcodes_annotated.Vervet_testis_1.end2.fastq.gz